PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004488061.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 532aa    MW: 60777.7 Da    PI: 8.0667
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004488061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-11338382554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h + ErrRR+++N+ f+ Lr+llP+      +K +Ka+iL  A e ++sL
  XP_004488061.1 338 HMISERRRREKLNDNFHALRTLLPQG-----TKKDKASILITAKETLRSL 382
                     8899********************97.....7***********9999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-14331401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.76E-10331386No hitNo description
PROSITE profilePS5088813.98333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-14336404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.5E-9338382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-9339388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MEGVFSLPIA IRTDFIHSLM QSLGCSYICL WTYDTIFPNR LSFLDGTYNV INNQPSSSLG  60
SVAQHLFNQY KILSFDVNDD RVPGLAFRNQ CPYLELQQLE LLTLSSKEIQ TQFYQEARIK  120
SAVFMGCNKG EIELGFLDMS QVDIQTALRG LFPEDFSRQQ QQQIDHQNNP LSSSSSSMRS  180
LSTGSPEYSS LIFNNINPGT SSPSFPENTL PPMRPISNTP LQLQLQLQHQ QLTHQITQTQ  240
FPTTTQIDHE TIMRAIHNVL TLPSHHQNEQ NNWPYGMHLE ASGFGRYRGG DRSPNIGSNF  300
RRQSLMKRSF AFFRSLNFIR LRERNQAATR PSNNQLHHMI SERRRREKLN DNFHALRTLL  360
PQGTKKDKAS ILITAKETLR SLMAEIDKLS KRNKDLMSQL QAKELSTTTT QEITKASNFS  420
SNERLNVRVL HVPESSTSSL ENQPMVDLQV NVMGQISQVD ILIRLLEFLK QVQHVNLVSI  480
DATNTNNAQV NSIHQLTFRL MITQGSEWDE GAFQEAVRRV VADFIQYVDQ NL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1341346ERRRRE
2342347RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004488061.10.0PREDICTED: putative transcription factor bHLH041
TrEMBLG7IIK80.0G7IIK8_MEDTR; Basic helix loop helix (BHLH) DNA-binding family protein
STRINGGLYMA15G18580.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-60bHLH family protein